I have a background in Biomedical Engineering (M.Sc. Tehran University of Medical Sciences, 2021) and Mechanical Engineering (B.Sc. University of Tehran, 2017). Having experience in programming, machine learning, and medical imaging, I have worked on projects like 3D modeling of human bones and heart, advanced image processing for CT, MRI, and ultrasound, and robotics, which have led to patents and publications. Currently, I am pursuing a PhD focused on developing a platform to provide 3D bone shape data for orthopedic applications. 

I primarily work with Python and have solid experience with machine learning frameworks such as TensorFlow and PyTorch. I have developed skills in web development using frameworks like Flask, FastAPI, Streamlit, and Trame, as well as in desktop software development with PyQt and PySide. Additionally, I am experienced in using deployment tools such as Docker.

My previous projects include automating femur measurements using deep learning and active shape models, developing Python software for 2D-to-3D image registration in knee implant research, and prototyping a rehabilitation robot.

I enjoy solving problems and learning new skills and always looking for ways to improve and contribute to meaningful projects in healthcare and engineering.

Linkedin  Github

Expertise

  • Computer Science

    • Computer Aided Design
    • Open Access
    • Clinical Application
    • Data Repository
    • Engineering Research
    • Grand Challenge
    • Metadata
    • Web of Science

Organisations

Publications

2026

Datasets for acquiring 3D bone shapes: A systematic review (2026)Journal of biomechanics, 202. Article 113288. Alavi, S. H., Tuijthof, G., Verdonschot, N. J. J. & Asseln, M.https://doi.org/10.1016/j.jbiomech.2026.113288Open-Access 3D Bone Shape Databases in Orthopedics: An Unmet Need? (2026)In Proceedings of The 25th Annual Meeting of the International Society for Computer Assisted Orthopaedic Surgery (pp. 1-8) (EPiC Series in Health Sciences; Vol. 8). EasyChair. Alavi, S. H., Verdonschot, N., Tuijthof, G. & Asseln, M.https://doi.org/10.29007/3392

Research profiles

Address

University of Twente

Horst Complex (building no. 20), room Z134
De Horst 2
7522 LW Enschede
Netherlands

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